kidwellj/mapping_environmental_action
1
0
Fork 0
mirror of https://github.com/kidwellj/mapping_environmental_action.git synced 2024-10-31 23:42:20 +00:00
Code Issues Packages Projects Releases Wiki Activity

added qgis viz and additional sbatch

Browse source
This commit is contained in:
Jeremy Kidwell 2019-03-27 12:34:54 +00:00
parent 16ed7fcd9b
commit 6a90c64a31
2 changed files with 18 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

18
sbatch_wild.sh Normal file
View file

@ -0,0 +1,18 @@
#!/bin/bash
#SBATCH --mail-type ALL
#SBATCH --cpus-per-task 1
#SBATCH --time 180:0
#SBATCH --ntasks 20
#SBATCH --qos bbdefault
module purge; module load bluebear
module load R/3.5.0-iomkl-2018a-X11-20180131
module load Pandoc/2.3.1
module load plotly/4.7.1-iomkl-2018a-R-3.5.0
module load rgeos/0.3-28-iomkl-2018a-R-3.5.0
module load tmap/2.2-iomkl-2018a-R-3.5.0
Rscript -e 'library(rmarkdown); rmarkdown::render("mapping_draft-hpc_optimised_wilderness.Rmd", "html_document")'
# cp mapping_draft.html /rds/projects/2016/kidwellj-01/mapping_environmental_action/
# cp figures/* /rds/projects/2016/kidwellj-01/mapping_environmental_action/figures
# cp derivedData/* /rds/projects/2016/kidwellj-01/mapping_environmental_action/derivedData

BIN
wilderness_layers.qgz Normal file
View file

Binary file not shown.