mirror of
https://github.com/kidwellj/mapping_environmental_action.git
synced 2024-11-01 07:52:21 +00:00
186 lines
6.3 KiB
R
186 lines
6.3 KiB
R
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local({
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# the requested version of renv
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version <- "0.9.3"
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# avoid recursion
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if (!is.na(Sys.getenv("RENV_R_INITIALIZING", unset = NA)))
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return(invisible(TRUE))
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# signal that we're loading renv during R startup
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Sys.setenv("RENV_R_INITIALIZING" = "true")
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on.exit(Sys.unsetenv("RENV_R_INITIALIZING"), add = TRUE)
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# signal that we've consented to use renv
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options(renv.consent = TRUE)
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# load the 'utils' package eagerly -- this ensures that renv shims, which
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# mask 'utils' packages, will come first on the search path
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library(utils, lib.loc = .Library)
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# check to see if renv has already been loaded
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if ("renv" %in% loadedNamespaces()) {
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# if renv has already been loaded, and it's the requested version of renv,
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# nothing to do
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spec <- .getNamespaceInfo(.getNamespace("renv"), "spec")
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if (identical(spec[["version"]], version))
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return(invisible(TRUE))
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# otherwise, unload and attempt to load the correct version of renv
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unloadNamespace("renv")
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}
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# construct path to renv in library
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libpath <- local({
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root <- Sys.getenv("RENV_PATHS_LIBRARY", unset = "renv/library")
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prefix <- paste("R", getRversion()[1, 1:2], sep = "-")
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# include SVN revision for development versions of R
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# (to avoid sharing platform-specific artefacts with released versions of R)
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devel <-
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identical(R.version[["status"]], "Under development (unstable)") ||
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identical(R.version[["nickname"]], "Unsuffered Consequences")
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if (devel)
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prefix <- paste(prefix, R.version[["svn rev"]], sep = "-r")
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file.path(root, prefix, R.version$platform)
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})
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# try to load renv from the project library
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if (requireNamespace("renv", lib.loc = libpath, quietly = TRUE)) {
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# warn if the version of renv loaded does not match
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loadedversion <- utils::packageDescription("renv", fields = "Version")
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if (version != loadedversion) {
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# assume four-component versions are from GitHub; three-component
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# versions are from CRAN
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components <- strsplit(loadedversion, "[.-]")[[1]]
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remote <- if (length(components) == 4L)
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paste("rstudio/renv", loadedversion, sep = "@")
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else
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paste("renv", loadedversion, sep = "@")
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fmt <- paste(
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"renv %1$s was loaded from project library, but renv %2$s is recorded in lockfile.",
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"Use `renv::record(\"%3$s\")` to record this version in the lockfile.",
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"Use `renv::restore(packages = \"renv\")` to install renv %2$s into the project library.",
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sep = "\n"
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)
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msg <- sprintf(fmt, loadedversion, version, remote)
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warning(msg, call. = FALSE)
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}
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# load the project
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return(renv::load())
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}
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# failed to find renv locally; we'll try to install from GitHub.
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# first, set up download options as appropriate (try to use GITHUB_PAT)
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install_renv <- function() {
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message("Failed to find installation of renv -- attempting to bootstrap...")
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# ensure .Rprofile doesn't get executed
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rpu <- Sys.getenv("R_PROFILE_USER", unset = NA)
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Sys.setenv(R_PROFILE_USER = "<NA>")
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on.exit({
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if (is.na(rpu))
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Sys.unsetenv("R_PROFILE_USER")
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else
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Sys.setenv(R_PROFILE_USER = rpu)
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}, add = TRUE)
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# prepare download options
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pat <- Sys.getenv("GITHUB_PAT")
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if (nzchar(Sys.which("curl")) && nzchar(pat)) {
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fmt <- "--location --fail --header \"Authorization: token %s\""
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extra <- sprintf(fmt, pat)
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saved <- options("download.file.method", "download.file.extra")
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options(download.file.method = "curl", download.file.extra = extra)
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on.exit(do.call(base::options, saved), add = TRUE)
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} else if (nzchar(Sys.which("wget")) && nzchar(pat)) {
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fmt <- "--header=\"Authorization: token %s\""
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extra <- sprintf(fmt, pat)
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saved <- options("download.file.method", "download.file.extra")
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options(download.file.method = "wget", download.file.extra = extra)
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on.exit(do.call(base::options, saved), add = TRUE)
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}
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# fix up repos
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repos <- getOption("repos")
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on.exit(options(repos = repos), add = TRUE)
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repos[repos == "@CRAN@"] <- "https://cloud.r-project.org"
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options(repos = repos)
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# check for renv on CRAN matching this version
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db <- as.data.frame(available.packages(), stringsAsFactors = FALSE)
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if ("renv" %in% rownames(db)) {
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entry <- db["renv", ]
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if (identical(entry$Version, version)) {
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message("* Installing renv ", version, " ... ", appendLF = FALSE)
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dir.create(libpath, showWarnings = FALSE, recursive = TRUE)
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utils::install.packages("renv", lib = libpath, quiet = TRUE)
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message("Done!")
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return(TRUE)
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}
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}
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# try to download renv
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message("* Downloading renv ", version, " ... ", appendLF = FALSE)
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prefix <- "https://api.github.com"
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url <- file.path(prefix, "repos/rstudio/renv/tarball", version)
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destfile <- tempfile("renv-", fileext = ".tar.gz")
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on.exit(unlink(destfile), add = TRUE)
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utils::download.file(url, destfile = destfile, mode = "wb", quiet = TRUE)
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message("Done!")
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# attempt to install it into project library
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message("* Installing renv ", version, " ... ", appendLF = FALSE)
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dir.create(libpath, showWarnings = FALSE, recursive = TRUE)
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# invoke using system2 so we can capture and report output
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bin <- R.home("bin")
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exe <- if (Sys.info()[["sysname"]] == "Windows") "R.exe" else "R"
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r <- file.path(bin, exe)
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args <- c("--vanilla", "CMD", "INSTALL", "-l", shQuote(libpath), shQuote(destfile))
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output <- system2(r, args, stdout = TRUE, stderr = TRUE)
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message("Done!")
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# check for successful install
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status <- attr(output, "status")
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if (is.numeric(status) && !identical(status, 0L)) {
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text <- c("Error installing renv", "=====================", output)
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writeLines(text, con = stderr())
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}
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}
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try(install_renv())
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# try again to load
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if (requireNamespace("renv", lib.loc = libpath, quietly = TRUE)) {
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message("Successfully installed and loaded renv ", version, ".")
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return(renv::load())
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}
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# failed to download or load renv; warn the user
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msg <- c(
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"Failed to find an renv installation: the project will not be loaded.",
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"Use `renv::activate()` to re-initialize the project."
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)
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warning(paste(msg, collapse = "\n"), call. = FALSE)
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})
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